csfmt_rts_data_v2 | Style | Ordering of variables | Time | Approved events | Location | Ages | Sex | Unified columns | Smart assignment | Context-specific columns | Examples | In action | Expand time to | Time series | Summary | Identifying the data structure of one column | Reference (Location)
This package is hidden from search results because it is not hosted in the universe of the upstream owner
niphr. To fix this you can add URL: https://niphr.r-universe.dev/cstidy to the package DESCRIPTION file. See also theR-universe documentation.Package: cstidy 2026.8.21
Richard Aubrey White
cstidy: Helpful Functions for Cleaning Surveillance Data
Helpful functions for the cleaning and manipulation of surveillance data, especially with regards to the creation and validation of panel data from individual level surveillance data.
Authors:
cstidy_2026.8.21.tar.gz
cstidy_2026.8.21.zip(r-4.7-any)cstidy_2026.8.21.zip(r-4.6-any)cstidy_2026.8.21.zip(r-4.5-any)
cstidy_2026.8.21.tgz(r-4.6-any)cstidy_2026.8.21.tgz(r-4.5-any)
cstidy_2026.8.21.tar.gz(r-4.7-any)cstidy_2026.8.21.tar.gz(r-4.6-any)
cstidy_2026.8.21.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
cstidy/json (API)
| # Install 'cstidy' in R: |
| install.packages('cstidy', repos = c('https://niphr.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/niphr/cstidy/issues
Pkgdown/docs site:https://niphr.github.io
Datasets:
- nor_covid19_cases_by_time_location_csfmt_rts_v1 - Covid-19 data for PCR-confirmed cases in Norway
- nor_covid19_icu_and_hospitalization_csfmt_rts_v1 - Norwegian Covid-19 data for ICU and hospitalization
Last updated from:1bfb159e79. Checks:9 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 180 | ||
| source / vignettes | OK | 210 | ||
| linux-release | OK | 155 | ||
| macos-release | OK | 175 | ||
| macos-oldrel | OK | 148 | ||
| windows-devel | OK | 91 | ||
| windows-release | OK | 69 | ||
| windows-oldrel | OK | 93 | ||
| wasm-release | OK | 137 |
Exports:csfmt_rts_data_v1csfmt_rts_data_v2csfmt_rts_data_v3expand_time_togenerate_test_dataheal_time_csfmt_rts_data_v1heal_time_csfmt_rts_data_v2identify_data_structureremove_class_csfmt_rts_dataset_csfmt_rts_data_v1set_csfmt_rts_data_v2set_csfmt_rts_data_v3unique_time_series
Dependencies:clicpp11crayoncsdatacstimedata.tabledigestfarverggplot2gluegtableisobandlabelinglifecyclemagrittrR6RColorBrewerrlangS7scalesstringistringrvctrsviridisLitewithr
Data format (csfmt_rts_data_v2)
Last update: 2026-08-21
Started: 2023-12-28
Introduction
What cstidy is for | Which format to use | Three things to know before you move to v3 | v3 derives fewer columns, and removes none | v3 is weekly only | csdb cannot check a v3 table, though it can store one | Where cstidy sits | Where to read next | csfmt_rts_data_v2 | Smart assignment | Summary | Identifying the data structure of one column
Last update: 2026-08-21
Started: 2023-01-16
Benchmarks
set_csfmt_rts_data_v1
Last update: 2025-10-27
Started: 2023-04-25
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Expand time to | expand_time_to |
| Generate test data | generate_test_data |
| Provides corresponding healed times (deprecated) | heal_time_csfmt_rts_data_v1 |
| Provides corresponding healed times (deprecated) | heal_time_csfmt_rts_data_v2 |
| Hash the data structure of a dataset for a given column | identify_data_structure identify_data_structure.csfmt_rts_data_v2 identify_data_structure.tbl_Microsoft SQL Server |
| Covid-19 data for PCR-confirmed cases in Norway (nation and county) | nor_covid19_cases_by_time_location_csfmt_rts_v1 |
| Norwegian Covid-19 data for ICU and hospitalization | nor_covid19_icu_and_hospitalization_csfmt_rts_v1 |
| Remove class csfmt_rts_data_* | remove_class_csfmt_rts_data |
| Convert data.table to csfmt_rts_data_v1 (deprecated) | csfmt_rts_data_v1 set_csfmt_rts_data_v1 |
| Convert data.table to csfmt_rts_data_v2 (deprecated) | csfmt_rts_data_v2 set_csfmt_rts_data_v2 |
| Convert a data.table to csfmt_rts_data_v3 (clean csfmt; explicit healing) | csfmt_rts_data_v3 set_csfmt_rts_data_v3 |
| Unique time series | unique_time_series |